Projection and Forecasting of Fish Populations, Stocks and
Fleets
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Documentation for package ‘FLasher’ version 0.6.8.9004
Help Pages
| $-method | Set and replacement accessors for fwdControl |
| $<--method | Set and replacement accessors for fwdControl |
| add_target_order_fls | Add the order column to the control target |
| basicBlock | A base class for drawing FCB bits |
| basicBlock-class | A base class for drawing FCB bits |
| biolBlock | A class for drawing a biological stock |
| biolBlock-class | A class for drawing a biological stock |
| biols | An FLBiols object used in mixed fishery vignette |
| calc_F | Calculate fishing mortality |
| catchBlock | A class for drawing a catch |
| catchBlock-class | A class for drawing a catch |
| coerce | Methods for coercing objects between classes |
| compare-method | Compare the result of a 'fwd()' run with the defined targets. |
| draw | Generic method for drawing components the FCB matrix |
| draw-basicBlock | Generic method for drawing components the FCB matrix |
| draw-biolBlock | Generic method for drawing components the FCB matrix |
| draw-catchBlock | Generic method for drawing components the FCB matrix |
| draw-FCBDrawing | Generic method for drawing components the FCB matrix |
| draw-fisheryBlock | Generic method for drawing components the FCB matrix |
| draw-fwdControl | Generic method for drawing components the FCB matrix |
| draw-matrix | Generic method for drawing components the FCB matrix |
| draw-method | Generic method for drawing components the FCB matrix |
| FCB | Create and extract the FCB slot in fwdControl |
| FCB-method | Create and extract the FCB slot in fwdControl |
| fcb2int | fcb2int function |
| FCB<- | Create and extract the FCB slot in fwdControl |
| FCB<--method | Create and extract the FCB slot in fwdControl |
| FCBDrawing | A class for drawing the FCB matrix |
| FCBDrawing-class | A class for drawing the FCB matrix |
| FCBDrawing-matrix | A class for drawing the FCB matrix |
| FCBDrawing-method | A class for drawing the FCB matrix |
| ffwd | Project forward an FLStock for a fbar target |
| fillchar | Fill up character slots |
| fillchar-method | Fill up character slots |
| fisheryBlock | A class for drawing a fishery |
| fisheryBlock-class | A class for drawing a fishery |
| flfs | An FLBiols object used in mixed fishery vignette |
| fwd | Method for running fishery projections |
| fwd-method | Method for running fishery projections |
| fwdControl | A class for the targets and limits of a fishery and stock projection. |
| fwdControl-class | A class for the targets and limits of a fishery and stock projection. |
| fwdControl-method | A class for the targets and limits of a fishery and stock projection. |
| fwdControl-methods | A class for the targets and limits of a fishery and stock projection. |
| G | A class for the targets and limits of a fishery and stock projection. |
| get_FLQuant_element | Return 1D element index of an FLQuant |
| get_FLQuant_elements | Return 1D vector of element indices of an FLQuant |
| guessfcb | Generate an FCB matrix from FLBiols and FLFisheries |
| inlineCxxPlugin | Make the plug in for inline Cxx |
| iters-method | Access and replace the iters slot of the fwdControl |
| iters<- | Access and replace the iters slot of the fwdControl |
| iters<--method | Access and replace the iters slot of the fwdControl |
| make_test_operatingModel | Make a test operating model from a single FLStock object |
| match_posns_names | Change names of biols, catches and fisheries in the control object into integer positions |
| operatingModelRun | Call the CPP operatingModel run method |
| parsefwdList | Parse the list argument to fwd to make a fwdControl object |
| partialF | Calculation of fisheries partial fishing mortalities |
| partialF-method | Calculation of fisheries partial fishing mortalities |
| plot-method | plot methods that highlight years in fwdControl |
| propagate-method | Propagate the fwdControl |
| random_FLBiolcpp_generator | Generate randomly sized and filled FLBiolcpp objects |
| random_FLCatches_generator | Generates an FLCatches object - a list of randomly sized and filled FLCatch objects |
| random_FLCatch_generator | Generate randomly sized and filled FLCatch objects |
| random_FLFisheries_generator | Generate a randomly filled and sized FLFisheries object |
| random_FLFishery_generator | Generate a randomly filled and sized FLFishery object |
| random_FLQuant_generator | Generate randomly sized and filled FLQuant objects |
| random_FLQuant_list_generator | Generate lists of randomly sized and filled FLQuant objects |
| random_fwdBiols_list_generator | Generates a list that can be passed to the CPP fwdBiols constructor |
| random_fwdControl_generator | Random fwdControl object creator |
| show-method | Show method for fwdControl |
| stf | Prepare object for future projection |
| stf-method | Prepare object for future projection |
| summary | summary method for fwdControl |
| summary-method | summary method for fwdControl |
| target | Access and replace the target |
| target-method | Access and replace the target |
| target<- | Access and replace the target |
| target<--method | Access and replace the target |
| targetOrder | Get the order of targets in a fwdControl |
| [-method | Set and replacement accessors for fwdControl |
| [<--method | Set and replacement accessors for fwdControl |